Dnf transaction test error

I am trying to update Fedora using sudo dnf update. It lists the packages to be updated, downloads them, but then fails with this message: Running transaction check Transaction check succeeded. Run...

I am trying to update Fedora using sudo dnf update. It lists the packages to be updated, downloads them, but then fails with this message:

Running transaction check
Transaction check succeeded.
Running transaction test
The downloaded packages were saved in cache until the next successful transaction.
You can remove cached packages by executing 'dnf clean packages'.
Error: Transaction test error:
  file /usr/bin/coredumpctl from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/system-generators/systemd-veritysetup-generator from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/system/systemd-binfmt.service from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/system/systemd-homed.service from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-binfmt from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-coredump from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-homed from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-portabled from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-sysctl from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-veritysetup from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/share/man/man5/org.freedesktop.portable1.5.gz from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/share/man/man8/systemd-coredump.8.gz from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/share/polkit-1/actions/org.freedesktop.home1.policy from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/share/polkit-1/actions/org.freedesktop.portable1.policy from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64

I tried googling but I am at a loss here (I am not an expert). I noticed no other issue or problem with the system so I don’t know where this new problem comes from.
Thanks a lot!

EDIT:

I tried to do sudo dnf clean all and then sudo dnf update, but this didn’t help. I post the full output below.

Then as suggested I tried sudo dnf upgrade --advisory=FEDORA-2022-1bf06aa328 and the output of that is:

Last metadata expiration check: 0:10:03 ago on Sat 23 Apr 2022 03:59:43 PM CEST.
No security updates needed, but 97 updates available
Dependencies resolved.
Nothing to do.
Complete!

The output from sudo dnf update is below:

Fedora 35 - x86_64                              6.4 MB/s |  79 MB     00:12    
Fedora 35 openh264 (From Cisco) - x86_64        4.1 kB/s | 2.5 kB     00:00    
Fedora Modular 35 - x86_64                      2.0 MB/s | 3.3 MB     00:01    
Fedora 35 - x86_64 - Updates                    3.3 MB/s |  29 MB     00:08    
Fedora Modular 35 - x86_64 - Updates            1.7 MB/s | 2.9 MB     00:01    
RPM Fusion for Fedora 35 - Free                 2.0 MB/s | 934 kB     00:00    
RPM Fusion for Fedora 35 - Free - Updates       1.2 MB/s | 401 kB     00:00    
RPM Fusion for Fedora 35 - Nonfree              353 kB/s | 239 kB     00:00    
RPM Fusion for Fedora 35 - Nonfree - Updates    345 kB/s | 100 kB     00:00    
skype (stable)                                   26 kB/s | 5.2 kB     00:00    
Last metadata expiration check: 0:00:01 ago on Sat 23 Apr 2022 03:59:43 PM CEST.
Dependencies resolved.
================================================================================
 Package                            Arch   Version               Repo      Size
================================================================================
Installing:
 kernel                             x86_64 5.16.20-200.fc35      updates   86 k
 kernel-core                        x86_64 5.16.20-200.fc35      updates   46 M
 kernel-modules                     x86_64 5.16.20-200.fc35      updates   51 M
 kernel-modules-extra               x86_64 5.16.20-200.fc35      updates  3.3 M
Upgrading:
 at                                 x86_64 3.2.5-3.fc35          updates   61 k
 cups                               x86_64 1:2.3.3op2-17.fc35    updates  1.3 M
 cups-client                        x86_64 1:2.3.3op2-17.fc35    updates   71 k
 cups-filesystem                    noarch 1:2.3.3op2-17.fc35    updates   14 k
 cups-filters                       x86_64 1.28.14-1.fc35        updates  770 k
 cups-filters-braille               x86_64 1.28.14-1.fc35        updates   38 k
 cups-filters-libs                  x86_64 1.28.14-1.fc35        updates  136 k
 cups-ipptool                       x86_64 1:2.3.3op2-17.fc35    updates  3.9 M
 cups-libs                          x86_64 1:2.3.3op2-17.fc35    updates  265 k
 dhcp-client                        x86_64 12:4.4.3-2.fc35       updates  799 k
 dhcp-common                        noarch 12:4.4.3-2.fc35       updates  126 k
 distribution-gpg-keys              noarch 1.68-1.fc35           updates  356 k
 ffmpeg-libs                        x86_64 4.4.2-1.fc35          rpmfusion-free-updates
                                                                          8.4 M
 firefox                            x86_64 99.0.1-1.fc35         updates  104 M
 fwupd                              x86_64 1.7.7-1.fc35          updates  1.9 M
 fwupd-plugin-flashrom              x86_64 1.7.7-1.fc35          updates   42 k
 fwupd-plugin-modem-manager         x86_64 1.7.7-1.fc35          updates   71 k
 fwupd-plugin-uefi-capsule-data     x86_64 1.7.7-1.fc35          updates  2.1 M
 gdisk                              x86_64 1.0.9-1.fc35          updates  244 k
 gegl04                             x86_64 0.4.36-1.fc35         updates  3.0 M
 gzip                               x86_64 1.10-6.fc35           updates  149 k
 imath                              x86_64 3.1.5-1.fc35          updates   94 k
 iwl100-firmware                    noarch 39.31.5.1-131.fc35    updates  137 k
 iwl1000-firmware                   noarch 1:39.31.5.1-131.fc35  updates  247 k
 iwl105-firmware                    noarch 18.168.6.1-131.fc35   updates  216 k
 iwl135-firmware                    noarch 18.168.6.1-131.fc35   updates  224 k
 iwl2000-firmware                   noarch 18.168.6.1-131.fc35   updates  218 k
 iwl2030-firmware                   noarch 18.168.6.1-131.fc35   updates  226 k
 iwl3160-firmware                   noarch 1:25.30.13.0-131.fc35 updates  2.5 M
 iwl3945-firmware                   noarch 15.32.2.9-131.fc35    updates   77 k
 iwl4965-firmware                   noarch 228.61.2.24-131.fc35  updates   90 k
 iwl5000-firmware                   noarch 8.83.5.1_1-131.fc35   updates  361 k
 iwl5150-firmware                   noarch 8.24.2.2-131.fc35     updates  133 k
 iwl6000-firmware                   noarch 9.221.4.1-131.fc35    updates  152 k
 iwl6000g2a-firmware                noarch 18.168.6.1-131.fc35   updates  333 k
 iwl6000g2b-firmware                noarch 18.168.6.1-131.fc35   updates  339 k
 iwl6050-firmware                   noarch 41.28.5.1-131.fc35    updates  291 k
 iwl7260-firmware                   noarch 1:25.30.13.0-131.fc35 updates   15 M
 iwlax2xx-firmware                  noarch 20220411-131.fc35     updates   39 M
 libertas-usb8388-firmware          noarch 2:20220411-131.fc35   updates  101 k
 libipa_hbac                        x86_64 2.7.0-1.fc35          updates   31 k
 libsolv                            x86_64 0.7.22-1.fc35         updates  403 k
 libsss_autofs                      x86_64 2.7.0-1.fc35          updates   32 k
 libsss_certmap                     x86_64 2.7.0-1.fc35          updates   74 k
 libsss_idmap                       x86_64 2.7.0-1.fc35          updates   36 k
 libsss_nss_idmap                   x86_64 2.7.0-1.fc35          updates   39 k
 libsss_sudo                        x86_64 2.7.0-1.fc35          updates   29 k
 linux-firmware                     noarch 20220411-131.fc35     updates  187 M
 linux-firmware-whence              noarch 20220411-131.fc35     updates   48 k
 nspr                               x86_64 4.32.0-6.fc35         updates  137 k
 openexr-libs                       x86_64 3.1.5-1.fc35          updates  1.1 M
 ostree                             x86_64 2022.2-1.fc35         updates  229 k
 ostree-libs                        x86_64 2022.2-1.fc35         updates  424 k
 perl-HTML-Parser                   x86_64 3.78-1.fc35           updates  119 k
 perl-libwww-perl                   noarch 6.62-1.fc35           updates  202 k
 pipewire                           x86_64 0.3.50-1.fc35         updates   39 k
 pipewire-alsa                      x86_64 0.3.50-1.fc35         updates   62 k
 pipewire-gstreamer                 x86_64 0.3.50-1.fc35         updates   59 k
 pipewire-jack-audio-connection-kit x86_64 0.3.50-1.fc35         updates  135 k
 pipewire-libs                      x86_64 0.3.50-1.fc35         updates  1.5 M
 pipewire-pulseaudio                x86_64 0.3.50-1.fc35         updates   27 k
 pipewire-utils                     x86_64 0.3.50-1.fc35         updates  325 k
 python3-beautifulsoup4             noarch 4.11.0-1.fc35         updates  134 k
 python3-regex                      x86_64 2022.3.15-1.fc35      updates  347 k
 rsync                              x86_64 3.2.3-9.fc35          updates  388 k
 smartmontools                      x86_64 1:7.3-2.fc35          updates  586 k
 squashfs-tools                     x86_64 4.5.1-1.fc35          updates  226 k
 sssd                               x86_64 2.7.0-1.fc35          updates   23 k
 sssd-ad                            x86_64 2.7.0-1.fc35          updates  205 k
 sssd-client                        x86_64 2.7.0-1.fc35          updates  143 k
 sssd-common                        x86_64 2.7.0-1.fc35          updates  1.5 M
 sssd-common-pac                    x86_64 2.7.0-1.fc35          updates   88 k
 sssd-ipa                           x86_64 2.7.0-1.fc35          updates  268 k
 sssd-kcm                           x86_64 2.7.0-1.fc35          updates  103 k
 sssd-krb5                          x86_64 2.7.0-1.fc35          updates   68 k
 sssd-krb5-common                   x86_64 2.7.0-1.fc35          updates   83 k
 sssd-ldap                          x86_64 2.7.0-1.fc35          updates  152 k
 sssd-nfs-idmap                     x86_64 2.7.0-1.fc35          updates   34 k
 sssd-proxy                         x86_64 2.7.0-1.fc35          updates   65 k
 sstp-client                        x86_64 1.0.17-1.fc35         updates   67 k
 systemd-container                  x86_64 249.11-1.fc35         updates  523 k
 systemd-oomd-defaults              noarch 249.11-1.fc35         updates   24 k
 systemd-rpm-macros                 noarch 249.11-1.fc35         updates   26 k
     replacing  systemd-rpm-macros.noarch 249.9-1.fc35
 systemd-udev                       x86_64 249.11-1.fc35         updates  1.8 M
     replacing  systemd-udev.x86_64 249.9-1.fc35
 tzdata                             noarch 2022a-2.fc35          updates  432 k
 tzdata-java                        noarch 2022a-2.fc35          updates  156 k
 wavpack                            x86_64 5.4.0-5.fc35          updates  212 k
 xen-libs                           x86_64 4.15.2-3.fc35         updates  637 k
 xen-licenses                       x86_64 4.15.2-3.fc35         updates   49 k
 xfce4-terminal                     x86_64 1.0.0-1.fc35          updates  692 k
 xorg-x11-xinit                     x86_64 1.4.0-14.fc35         updates   55 k
 xz                                 x86_64 5.2.5-9.fc35          updates  214 k
 xz-libs                            x86_64 5.2.5-9.fc35          updates   92 k
Installing dependencies:
 libjose                            x86_64 11-3.fc35             fedora    64 k
 sssd-idp                           x86_64 2.7.0-1.fc35          updates   34 k
Removing:
 kernel                             x86_64 5.16.16-200.fc35      @updates   0  
 kernel-core                        x86_64 5.16.16-200.fc35      @updates  87 M
 kernel-modules                     x86_64 5.16.16-200.fc35      @updates  51 M
 kernel-modules-extra               x86_64 5.16.16-200.fc35      @updates 3.1 M

Transaction Summary
================================================================================
Install   6 Packages
Upgrade  93 Packages
Remove    4 Packages

Total download size: 489 M
Is this ok [y/N]: y
Downloading Packages:
Fedora 35 - x86_64 -209% [=========================================-]  49 kB/s |(1/99): libjose-11-3.fc35.x86_64.rpm            572 kB/s |  64 kB     00:00    
(2/99): kernel-5.16.20-200.fc35.x86_64.rpm      396 kB/s |  86 kB     00:00    
(3/99): openexr-libs-3.1.4-1.fc35_3.1.5-1.fc35. 508 kB/s | 118 kB     00:00    
(4/99): kernel-modules-extra-5.16.20-200.fc35.x 177 kB/s | 3.3 MB     00:18    
(5/99): sssd-idp-2.7.0-1.fc35.x86_64.rpm         36 kB/s |  34 kB     00:00    
(6/99): at-3.2.5-3.fc35.x86_64.rpm               56 kB/s |  61 kB     00:01    
(7/99): kernel-core-5.16.20-200.fc35.x86_64.rpm 1.9 MB/s |  46 MB     00:24    
(8/99): cups-2.3.3op2-17.fc35.x86_64.rpm        391 kB/s | 1.3 MB     00:03    
(9/99): cups-filesystem-2.3.3op2-17.fc35.noarch  16 kB/s |  14 kB     00:00    
(10/99): cups-client-2.3.3op2-17.fc35.x86_64.rp  53 kB/s |  71 kB     00:01    
(11/99): cups-filters-braille-1.28.14-1.fc35.x8  46 kB/s |  38 kB     00:00    
(12/99): cups-filters-libs-1.28.14-1.fc35.x86_6  77 kB/s | 136 kB     00:01    
(13/99): cups-filters-1.28.14-1.fc35.x86_64.rpm 139 kB/s | 770 kB     00:05    
(14/99): cups-libs-2.3.3op2-17.fc35.x86_64.rpm  108 kB/s | 265 kB     00:02    
(15/99): dhcp-client-4.4.3-2.fc35.x86_64.rpm    142 kB/s | 799 kB     00:05    
(16/99): dhcp-common-4.4.3-2.fc35.noarch.rpm     85 kB/s | 126 kB     00:01    
(17/99): distribution-gpg-keys-1.68-1.fc35.noar 121 kB/s | 356 kB     00:02    
(18/99): kernel-modules-5.16.20-200.fc35.x86_64 1.0 MB/s |  51 MB     00:49    
(19/99): cups-ipptool-2.3.3op2-17.fc35.x86_64.r 166 kB/s | 3.9 MB     00:23    
(20/99): fwupd-plugin-flashrom-1.7.7-1.fc35.x86  44 kB/s |  42 kB     00:00    
(21/99): fwupd-plugin-modem-manager-1.7.7-1.fc3  45 kB/s |  71 kB     00:01    
(22/99): fwupd-1.7.7-1.fc35.x86_64.rpm          156 kB/s | 1.9 MB     00:12    
(23/99): gdisk-1.0.9-1.fc35.x86_64.rpm          102 kB/s | 244 kB     00:02    
(24/99): fwupd-plugin-uefi-capsule-data-1.7.7-1 151 kB/s | 2.1 MB     00:14    
(25/99): gzip-1.10-6.fc35.x86_64.rpm             84 kB/s | 149 kB     00:01    
(26/99): imath-3.1.5-1.fc35.x86_64.rpm           62 kB/s |  94 kB     00:01    
(27/99): iwl100-firmware-39.31.5.1-131.fc35.noa  68 kB/s | 137 kB     00:02    
(28/99): iwl1000-firmware-39.31.5.1-131.fc35.no 108 kB/s | 247 kB     00:02    
(29/99): iwl105-firmware-18.168.6.1-131.fc35.no  99 kB/s | 216 kB     00:02    
(30/99): iwl135-firmware-18.168.6.1-131.fc35.no  98 kB/s | 224 kB     00:02    
(31/99): gegl04-0.4.36-1.fc35.x86_64.rpm        161 kB/s | 3.0 MB     00:18    
(32/99): iwl2000-firmware-18.168.6.1-131.fc35.n 100 kB/s | 218 kB     00:02    
(33/99): iwl2030-firmware-18.168.6.1-131.fc35.n 105 kB/s | 226 kB     00:02    
(34/99): iwl3945-firmware-15.32.2.9-131.fc35.no  51 kB/s |  77 kB     00:01    
(35/99): iwl4965-firmware-228.61.2.24-131.fc35.  56 kB/s |  90 kB     00:01    
(36/99): iwl5000-firmware-8.83.5.1_1-131.fc35.n 115 kB/s | 361 kB     00:03    
(37/99): iwl5150-firmware-8.24.2.2-131.fc35.noa  65 kB/s | 133 kB     00:02    

...OMISSIS...

(99/99): ffmpeg-libs-4.4.2-1.fc35.x86_64.rpm    1.3 MB/s | 8.4 MB     00:06    
[DRPM] openexr-libs-3.1.4-1.fc35_3.1.5-1.fc35.x86_64.drpm: done                
--------------------------------------------------------------------------------
Total                                           2.1 MB/s | 488 MB     03:56     
Delta RPMs reduced 489.0 MB of updates to 488.1 MB (0.2% saved)
Running transaction check
Transaction check succeeded.
Running transaction test
The downloaded packages were saved in cache until the next successful transaction.
You can remove cached packages by executing 'dnf clean packages'.
Error: Transaction test error:
  file /usr/bin/coredumpctl from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/system-generators/systemd-veritysetup-generator from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/system/systemd-binfmt.service from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/system/systemd-homed.service from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-binfmt from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-coredump from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-homed from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-portabled from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-sysctl from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/lib/systemd/systemd-veritysetup from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/share/man/man5/org.freedesktop.portable1.5.gz from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/share/man/man8/systemd-coredump.8.gz from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/share/polkit-1/actions/org.freedesktop.home1.policy from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64
  file /usr/share/polkit-1/actions/org.freedesktop.portable1.policy from install of systemd-udev-249.11-1.fc35.x86_64 conflicts with file from package systemd-249.7-2.fc35.x86_64

EDIT:

The output of sudo dnf check is:

cryptsetup-libs-2.4.2-1.fc35.x86_64 is a duplicate with cryptsetup-libs-2.4.3-1.fc35.x86_64
evolution-data-server-3.42.4-1.fc35.x86_64 is a duplicate with evolution-data-server-3.42.4-2.fc35.x86_64
evolution-data-server-langpacks-3.42.4-1.fc35.noarch is a duplicate with evolution-data-server-langpacks-3.42.4-2.fc35.noarch
libreoffice-data-1:7.2.5.2-6.fc35.noarch is a duplicate with libreoffice-data-1:7.2.6.2-1.fc35.noarch
pam-1.5.2-5.fc35.x86_64 is a duplicate with pam-1.5.2-7.fc35.x86_64
pcre2-10.37-4.fc35.x86_64 is a duplicate with pcre2-10.39-1.fc35.x86_64
pcre2-syntax-10.37-4.fc35.noarch is a duplicate with pcre2-syntax-10.39-1.fc35.noarch
selinux-policy-35.15-1.fc35.noarch is a duplicate with selinux-policy-35.16-1.fc35.noarch
selinux-policy-targeted-35.15-1.fc35.noarch is a duplicate with selinux-policy-targeted-35.16-1.fc35.noarch
smartmontools-selinux-1:7.2-11.fc35.noarch is a duplicate with smartmontools-selinux-1:7.3-2.fc35.noarch
systemd-249.7-2.fc35.x86_64 is a duplicate with systemd-249.11-1.fc35.x86_64
systemd-249.7-2.fc35.x86_64 is a duplicate with systemd-249.9-1.fc35.x86_64
systemd-libs-249.7-2.fc35.x86_64 is a duplicate with systemd-libs-249.11-1.fc35.x86_64
systemd-libs-249.7-2.fc35.x86_64 is a duplicate with systemd-libs-249.9-1.fc35.x86_64
systemd-networkd-249.7-2.fc35.x86_64 is a duplicate with systemd-networkd-249.11-1.fc35.x86_64
systemd-networkd-249.7-2.fc35.x86_64 is a duplicate with systemd-networkd-249.9-1.fc35.x86_64
systemd-pam-249.7-2.fc35.x86_64 is a duplicate with systemd-pam-249.11-1.fc35.x86_64
systemd-pam-249.7-2.fc35.x86_64 is a duplicate with systemd-pam-249.9-1.fc35.x86_64
systemd-resolved-249.7-2.fc35.x86_64 is a duplicate with systemd-resolved-249.11-1.fc35.x86_64
systemd-resolved-249.7-2.fc35.x86_64 is a duplicate with systemd-resolved-249.9-1.fc35.x86_64
systemd-rpm-macros-249.7-2.fc35.noarch is a duplicate with systemd-rpm-macros-249.9-1.fc35.noarch
systemd-udev-249.7-2.fc35.x86_64 is a duplicate with systemd-udev-249.9-1.fc35.x86_64
vim-data-2:8.2.4621-1.fc35.noarch is a duplicate with vim-data-2:8.2.4701-1.fc35.noarch
vim-filesystem-2:8.2.4621-1.fc35.noarch is a duplicate with vim-filesystem-2:8.2.4701-1.fc35.noarch
Error: Check discovered 24 problem(s)

Running sudo dnf upgrade --allowerasing --best did not help (same error as with sudo dnf update).

EDIT:

output of dnf repoquery --duplicates

Fedora 35 - x86_64                                                                                                                                                                                            4.5 MB/s |  79 MB     00:17    
Fedora 35 openh264 (From Cisco) - x86_64                                                                                                                                                                      2.2 kB/s | 2.5 kB     00:01    
Fedora Modular 35 - x86_64                                                                                                                                                                                    1.9 MB/s | 3.3 MB     00:01    
Fedora 35 - x86_64 - Updates                                                                                                                                                                                  4.5 MB/s |  29 MB     00:06    
Fedora Modular 35 - x86_64 - Updates                                                                                                                                                                          1.7 MB/s | 2.9 MB     00:01    
RPM Fusion for Fedora 35 - Free                                                                                                                                                                               1.2 MB/s | 934 kB     00:00    
RPM Fusion for Fedora 35 - Free - Updates                                                                                                                                                                     1.1 MB/s | 401 kB     00:00    
RPM Fusion for Fedora 35 - Nonfree                                                                                                                                                                            722 kB/s | 239 kB     00:00    
RPM Fusion for Fedora 35 - Nonfree - Updates                                                                                                                                                                  322 kB/s | 100 kB     00:00    
skype (stable)                                                                                                                                                                                                 20 kB/s | 5.2 kB     00:00    
Last metadata expiration check: 0:00:01 ago on Sat 23 Apr 2022 06:18:21 PM CEST.
cryptsetup-libs-0:2.4.2-1.fc35.x86_64
cryptsetup-libs-0:2.4.3-1.fc35.x86_64
evolution-data-server-0:3.42.4-1.fc35.x86_64
evolution-data-server-0:3.42.4-2.fc35.x86_64
evolution-data-server-langpacks-0:3.42.4-1.fc35.noarch
evolution-data-server-langpacks-0:3.42.4-2.fc35.noarch
libreoffice-data-1:7.2.5.2-6.fc35.noarch
libreoffice-data-1:7.2.6.2-1.fc35.noarch
pam-0:1.5.2-5.fc35.x86_64
pam-0:1.5.2-7.fc35.x86_64
pcre2-0:10.37-4.fc35.x86_64
pcre2-0:10.39-1.fc35.x86_64
pcre2-syntax-0:10.37-4.fc35.noarch
pcre2-syntax-0:10.39-1.fc35.noarch
selinux-policy-0:35.15-1.fc35.noarch
selinux-policy-0:35.16-1.fc35.noarch
selinux-policy-targeted-0:35.15-1.fc35.noarch
selinux-policy-targeted-0:35.16-1.fc35.noarch
smartmontools-selinux-1:7.2-11.fc35.noarch
smartmontools-selinux-1:7.3-2.fc35.noarch
systemd-0:249.11-1.fc35.x86_64
systemd-0:249.7-2.fc35.x86_64
systemd-0:249.9-1.fc35.x86_64
systemd-libs-0:249.11-1.fc35.x86_64
systemd-libs-0:249.7-2.fc35.x86_64
systemd-libs-0:249.9-1.fc35.x86_64
systemd-networkd-0:249.11-1.fc35.x86_64
systemd-networkd-0:249.7-2.fc35.x86_64
systemd-networkd-0:249.9-1.fc35.x86_64
systemd-pam-0:249.11-1.fc35.x86_64
systemd-pam-0:249.7-2.fc35.x86_64
systemd-pam-0:249.9-1.fc35.x86_64
systemd-resolved-0:249.11-1.fc35.x86_64
systemd-resolved-0:249.7-2.fc35.x86_64
systemd-resolved-0:249.9-1.fc35.x86_64
systemd-rpm-macros-0:249.7-2.fc35.noarch
systemd-rpm-macros-0:249.9-1.fc35.noarch
systemd-udev-0:249.7-2.fc35.x86_64
systemd-udev-0:249.9-1.fc35.x86_64
vim-data-2:8.2.4621-1.fc35.noarch
vim-data-2:8.2.4701-1.fc35.noarch
vim-filesystem-2:8.2.4621-1.fc35.noarch
vim-filesystem-2:8.2.4701-1.fc35.noarch

EDIT: I did sudo package-cleanup --cleandupes but I am unsure how to deal with this:

Last metadata expiration check: 0:03:48 ago on Sun 24 Apr 2022 01:39:51 PM CEST.
Installed package systemd-249.11-1.fc35.x86_64 not available.
Installed package systemd-udev-249.9-1.fc35.x86_64 not available.
Installed package systemd-libs-249.11-1.fc35.x86_64 not available.
Installed package systemd-rpm-macros-249.9-1.fc35.noarch not available.
Installed package systemd-networkd-249.11-1.fc35.x86_64 not available.
Installed package systemd-pam-249.11-1.fc35.x86_64 not available.
Installed package systemd-resolved-249.11-1.fc35.x86_64 not available.
Installed package vim-data-2:8.2.4701-1.fc35.noarch not available.
Installed package vim-filesystem-2:8.2.4701-1.fc35.noarch not available.
Error: 
 Problem: The operation would result in removing the following protected packages: systemd, systemd-udev
(try to add '--skip-broken' to skip uninstallable packages)

Hello all. Today I ran into a problem when I tried to update:

$ sudo dnf update
Failed to synchronize cache for repo 'atrpms', disabling.
Last metadata expiration check: 0:44:09 ago on Wed Feb 22 10:02:18 2017.
Dependencies resolved.
======================================================================================================================
 Package                               Arch       Version                         Repository                     Size
======================================================================================================================
Installing:
 at-spi2-atk                           i686       2.20.1-1.fc24                   fedora                         85 k
 at-spi2-core                          i686       2.20.2-2.fc24                   updates                       162 k
 cairo-gobject                         i686       1.14.8-1.fc24                   updates                        29 k
 colord-libs                           i686       1.3.4-1.fc24                    updates                       199 k
 glib-networking                       i686       2.48.2-1.fc24                   fedora                        136 k
 gtk3                                  i686       3.20.9-1.fc24                   updates                       4.3 M
 json-glib                             i686       1.2.2-1.fc24                    updates                       138 k
 kernel                                x86_64     4.9.10-100.fc24                 updates                        78 k
 kernel-core                           x86_64     4.9.10-100.fc24                 updates                        20 M
 kernel-devel                          x86_64     4.9.10-100.fc24                 updates                        11 M
 kernel-modules                        x86_64     4.9.10-100.fc24                 updates                        22 M
 kernel-modules-extra                  x86_64     4.9.10-100.fc24                 updates                       2.2 M
 lcms2                                 i686       2.8-2.fc24                      updates                       159 k
 libdbusmenu                           i686       12.10.2-10.fc24                 fedora                         73 k
 libdbusmenu                           x86_64     12.10.2-10.fc24                 fedora                         73 k
 libdbusmenu-gtk3                      i686       12.10.2-10.fc24                 fedora                         37 k
 libdbusmenu-gtk3                      x86_64     12.10.2-10.fc24                 fedora                         37 k
 libepoxy                              i686       1.3.1-2.fc24                    fedora                        209 k
 libgusb                               i686       0.2.9-1.fc24                    fedora                         46 k
 libmodman                             i686       2.0.1-12.fc24                   fedora                         34 k
 libproxy                              i686       0.4.12-3.fc24                   fedora                         71 k
 libsoup                               i686       2.54.1-1.fc24                   fedora                        382 k
 libusbx                               i686       1.0.21-0.1.git448584a.fc24      fedora                         67 k
 libwayland-cursor                     i686       1.10.0-1.fc24                   fedora                         22 k
 libxkbcommon                          i686       0.6.1-1.fc24                    updates                       115 k
 mesa-libwayland-egl                   i686       12.0.3-2.fc24                   updates                        24 k
 rest                                  i686       0.8.0-1.fc24                    fedora                         66 k
Upgrading:
 bind-libs                             x86_64     32:9.10.4-3.P6.fc24             updates                       152 k
 bind-libs-lite                        x86_64     32:9.10.4-3.P6.fc24             updates                       1.0 M
 bind-license                          noarch     32:9.10.4-3.P6.fc24             updates                        89 k
 bind-utils                            x86_64     32:9.10.4-3.P6.fc24             updates                       406 k
 dbus                                  x86_64     1:1.11.10-1.fc24                updates                       248 k
 dbus-devel                            x86_64     1:1.11.10-1.fc24                updates                        60 k
 dbus-libs                             i686       1:1.11.10-1.fc24                updates                       177 k
 dbus-libs                             x86_64     1:1.11.10-1.fc24                updates                       173 k
 dbus-x11                              x86_64     1:1.11.10-1.fc24                updates                        52 k
 ffmpeg                                x86_64     3.1.7-1.fc24                    rpmfusion-free-updates        1.4 M
 ffmpeg-libs                           x86_64     3.1.7-1.fc24                    rpmfusion-free-updates        6.0 M
 firewall-config                       noarch     0.4.4.3-1.fc24                  updates                       154 k
 firewalld                             noarch     0.4.4.3-1.fc24                  updates                       462 k
 firewalld-filesystem                  noarch     0.4.4.3-1.fc24                  updates                        68 k
 flatpak                               x86_64     0.8.3-1.fc24                    updates                       692 k
 flatpak-libs                          x86_64     0.8.3-1.fc24                    updates                       214 k
 ibus-typing-booster                   noarch     1.5.21-1.fc24                   updates                       3.8 M
 kernel-headers                        x86_64     4.9.10-100.fc24                 updates                       1.1 M
 libavdevice                           x86_64     3.1.7-1.fc24                    rpmfusion-free-updates         87 k
 libgphoto2                            x86_64     2.5.12-1.fc24                   updates                       1.4 M
 libsolv                               x86_64     0.6.26-1.fc24                   updates                       361 k
 perf                                  x86_64     4.9.10-100.fc24                 updates                       1.5 M
 python3-firewall                      noarch     0.4.4.3-1.fc24                  updates                       358 k
 sil-padauk-fonts                      noarch     3.002-1.fc24                    updates                       762 k
 steam                                 i686       1.0.0.54-6.fc24                 rpmfusion-nonfree-updates     2.6 M
 youtube-dl                            noarch     2017.02.16-1.fc24               updates                       2.4 M
Removing:
 kernel                                x86_64     4.9.7-101.fc24                  @updates                        0  
 kernel-core                           x86_64     4.9.7-101.fc24                  @updates                       53 M
 kernel-devel                          x86_64     4.9.7-101.fc24                  @updates                       41 M
 kernel-modules                        x86_64     4.9.7-101.fc24                  @updates                       22 M
 kernel-modules-extra                  x86_64     4.9.7-101.fc24                  @updates                      2.0 M
 kmod-nvidia-4.9.7-101.fc24.x86_64     x86_64     1:375.26-1.fc24                 @@commandline                  18 M
Skipping packages with broken dependencies:
 efivar-libs                           x86_64     30-4.fc24                       updates                        68 k

Transaction Summary
======================================================================================================================
Install  27 Packages
Upgrade  26 Packages
Remove    6 Packages
Skip      1 Package

Total size: 87 M
Is this ok [y/N]: y
Downloading Packages:
[SKIPPED] kernel-core-4.9.10-100.fc24.x86_64.rpm: Already downloaded                                                 
[SKIPPED] kernel-4.9.10-100.fc24.x86_64.rpm: Already downloaded                                                      
[SKIPPED] kernel-devel-4.9.10-100.fc24.x86_64.rpm: Already downloaded                                                
[SKIPPED] kernel-modules-extra-4.9.10-100.fc24.x86_64.rpm: Already downloaded                                        
[SKIPPED] kernel-modules-4.9.10-100.fc24.x86_64.rpm: Already downloaded                                              
[SKIPPED] libdbusmenu-gtk3-12.10.2-10.fc24.i686.rpm: Already downloaded                                              
[SKIPPED] gtk3-3.20.9-1.fc24.i686.rpm: Already downloaded                                                            
[SKIPPED] libdbusmenu-12.10.2-10.fc24.i686.rpm: Already downloaded                                                   
[SKIPPED] libdbusmenu-gtk3-12.10.2-10.fc24.x86_64.rpm: Already downloaded                                            
[SKIPPED] at-spi2-atk-2.20.1-1.fc24.i686.rpm: Already downloaded                                                     
[SKIPPED] cairo-gobject-1.14.8-1.fc24.i686.rpm: Already downloaded                                                   
[SKIPPED] colord-libs-1.3.4-1.fc24.i686.rpm: Already downloaded                                                      
[SKIPPED] libepoxy-1.3.1-2.fc24.i686.rpm: Already downloaded                                                         
[SKIPPED] libwayland-cursor-1.10.0-1.fc24.i686.rpm: Already downloaded                                               
[SKIPPED] rest-0.8.0-1.fc24.i686.rpm: Already downloaded                                                             
[SKIPPED] libdbusmenu-12.10.2-10.fc24.x86_64.rpm: Already downloaded                                                 
[SKIPPED] at-spi2-core-2.20.2-2.fc24.i686.rpm: Already downloaded                                                    
[SKIPPED] libgusb-0.2.9-1.fc24.i686.rpm: Already downloaded                                                          
[SKIPPED] libusbx-1.0.21-0.1.git448584a.fc24.i686.rpm: Already downloaded                                            
[SKIPPED] libsoup-2.54.1-1.fc24.i686.rpm: Already downloaded                                                         
[SKIPPED] glib-networking-2.48.2-1.fc24.i686.rpm: Already downloaded                                                 
[SKIPPED] libproxy-0.4.12-3.fc24.i686.rpm: Already downloaded                                                        
[SKIPPED] libmodman-2.0.1-12.fc24.i686.rpm: Already downloaded                                                       
[SKIPPED] json-glib-1.2.2-1.fc24.i686.rpm: Already downloaded                                                        
[SKIPPED] libxkbcommon-0.6.1-1.fc24.i686.rpm: Already downloaded                                                     
[SKIPPED] mesa-libwayland-egl-12.0.3-2.fc24.i686.rpm: Already downloaded                                             
[SKIPPED] lcms2-2.8-2.fc24.i686.rpm: Already downloaded                                                              
[SKIPPED] bind-libs-9.10.4-3.P6.fc24.x86_64.rpm: Already downloaded                                                  
[SKIPPED] bind-libs-lite-9.10.4-3.P6.fc24.x86_64.rpm: Already downloaded                                             
[SKIPPED] bind-license-9.10.4-3.P6.fc24.noarch.rpm: Already downloaded                                               
[SKIPPED] bind-utils-9.10.4-3.P6.fc24.x86_64.rpm: Already downloaded                                                 
[SKIPPED] dbus-1.11.10-1.fc24.x86_64.rpm: Already downloaded                                                         
[SKIPPED] dbus-libs-1.11.10-1.fc24.x86_64.rpm: Already downloaded                                                    
[SKIPPED] dbus-x11-1.11.10-1.fc24.x86_64.rpm: Already downloaded                                                     
[SKIPPED] dbus-devel-1.11.10-1.fc24.x86_64.rpm: Already downloaded                                                   
[SKIPPED] dbus-libs-1.11.10-1.fc24.i686.rpm: Already downloaded                                                      
[SKIPPED] ffmpeg-3.1.7-1.fc24.x86_64.rpm: Already downloaded                                                         
[SKIPPED] ffmpeg-libs-3.1.7-1.fc24.x86_64.rpm: Already downloaded                                                    
[SKIPPED] firewall-config-0.4.4.3-1.fc24.noarch.rpm: Already downloaded                                              
[SKIPPED] firewalld-0.4.4.3-1.fc24.noarch.rpm: Already downloaded                                                    
[SKIPPED] firewalld-filesystem-0.4.4.3-1.fc24.noarch.rpm: Already downloaded                                         
[SKIPPED] python3-firewall-0.4.4.3-1.fc24.noarch.rpm: Already downloaded                                             
[SKIPPED] flatpak-0.8.3-1.fc24.x86_64.rpm: Already downloaded                                                        
[SKIPPED] flatpak-libs-0.8.3-1.fc24.x86_64.rpm: Already downloaded                                                   
[SKIPPED] ibus-typing-booster-1.5.21-1.fc24.noarch.rpm: Already downloaded                                           
[SKIPPED] kernel-headers-4.9.10-100.fc24.x86_64.rpm: Already downloaded                                              
[SKIPPED] libavdevice-3.1.7-1.fc24.x86_64.rpm: Already downloaded                                                    
[SKIPPED] libgphoto2-2.5.12-1.fc24.x86_64.rpm: Already downloaded                                                    
[SKIPPED] libsolv-0.6.26-1.fc24.x86_64.rpm: Already downloaded                                                       
[SKIPPED] perf-4.9.10-100.fc24.x86_64.rpm: Already downloaded                                                        
[SKIPPED] sil-padauk-fonts-3.002-1.fc24.noarch.rpm: Already downloaded                                               
[SKIPPED] steam-1.0.0.54-6.fc24.i686.rpm: Already downloaded                                                         
[SKIPPED] youtube-dl-2017.02.16-1.fc24.noarch.rpm: Already downloaded                                                
Running transaction check
Transaction check succeeded.
Running transaction test
The downloaded packages were saved in cache until the next successful transaction.
You can remove cached packages by executing 'dnf clean packages'.
Error: Transaction check error:
  file /usr/share/doc/lcms2/AUTHORS from install of lcms2-2.8-2.fc24.i686 conflicts with file from package lcms2-2.7-3.fc24.x86_64
  file /usr/share/doc/json-glib/NEWS from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/as/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/bg/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/bn_IN/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/bs/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/ca/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/ca@valencia/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/cs/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/da/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/de/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/el/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/en_GB/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/eo/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/es/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/et/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/eu/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/fr/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/fur/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/gl/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/he/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/hi/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/hu/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/id/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/it/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/ja/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/ko/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/ky/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/lt/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/lv/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/ml/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/nb/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/oc/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/or/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/pa/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/pl/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/pt/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/pt_BR/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/ro/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/ru/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/sk/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/sl/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/sr/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/sr@latin/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/sv/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/te/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/tg/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/tr/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/ug/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/uk/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/vi/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/zh_CN/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/zh_HK/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64
  file /usr/share/locale/zh_TW/LC_MESSAGES/json-glib-1.0.mo from install of json-glib-1.2.2-1.fc24.i686 conflicts with file from package json-glib-1.2.0-1.fc24.x86_64

Error Summary
-------------

After a short search on the internet I found that several people could resolve similar issues by uninstalling, updating, and reinstalling the conflicting packages. So, I wanted to try that, with

$ sudo dnf remove json-glib

However, the log ( http://pastebin.com/5q5JsHVy ; pastebin due to reddit’s character limit) lists over 500 packages, with a total of 2.3 GB. Also, it seems to me that it would install many many quite important packages (such as firefox, gnome-terminal, gnome-session*, and more).

I also tried cleaning dnf’s cache and just trying to update json-glib (and/or lcms2), without success. Is there another way to solve this? (A way that does not involve un & re-installing almost my entire system).

Thanks for your help already in advance!

dnf update giving me this error, after upgrading my centos7 to centos8

Error: Transaction check error:
  file /usr/lib64/libgdbm_compat.so.4.0.0 from install of gdbm-libs-1:1.18-1.el8.x86_64 conflicts with file from package gdbm-1.10-8.el7.x86_64

I tried dnf install -y libgdbm --best --allowerasing and dnf install -y gdbm --best --allowerasing but dnf update still has this error.

How can I fix this?

UPDATE :

dnf upgrade --best --allowerasing results this :

Error: transaction check vs depsolve:
(gcc >= 8 with gcc < 9) is needed by annobin-8.78-1.el8.x86_64
rpmlib(RichDependencies) <= 4.12.0-1 is needed by annobin-8.78-1.el8.x86_64
(annobin if gcc) is needed by redhat-rpm-config-120-1.el8.noarch
rpmlib(RichDependencies) <= 4.12.0-1 is needed by redhat-rpm-config-120-1.el8.noarch
To diagnose the problem, try running: 'rpm -Va --nofiles --nodigest'.
You probably have corrupted RPMDB, running 'rpm --rebuilddb' might fix the issue.
The downloaded packages were saved in cache until the next successful transaction.
You can remove cached packages by executing 'dnf clean packages'.

https://forums.centos.org/viewtopic.php?f=54&t=73160

asked Jan 15, 2020 at 8:32

Exlord's user avatar

ExlordExlord

2631 gold badge3 silver badges8 bronze badges

it seems like gdbm has changed its way of packaging.

The old version gdbm-1.10-8.el7.x86_64 provides the same file as the new gdbm-libs-1:1.18-1.el8.x86_64, so the best you can do probably is erase manually gdbm-1.10-8.el7.x86_64 before retrying the update:

dnf remove gdbm-1.10-8.el7.x86_64

If this does not work because someone needs /usr/lib64/libgdbm_compat.so.4.0.0 then you can use the more complicated swap command:

dnf swap gdbm-1.10-8.el7.x86_64 gdbm-libs-1:1.18-1.el8.x86_64

edit

It seems like we need to convince dnf to change gdbm into gdbm AND gdbm-libs. Try with:

dnf install gdbm gdbm-libs --best --allowerasing

NOTE: I tried the centos7 — centos8 upgrade procedure and ran into multiple problems. I had to remove quite a few packages before this migration would work. That is the trouble when files change from packages, when they are renamed etc. I suspect that now that I got this part working the rest should follow quite fine. Good luck.

answered Jan 15, 2020 at 8:42

Chris Maes's user avatar

Chris MaesChris Maes

5762 silver badges11 bronze badges

2

I managed to get past this by manually updating gdbm and gdbm-libs using rpm (and ignoring dependencies).

sudo rpm -e --nodeps gdbm-1.10-8.el7.x86_64
sudo rpm -i /var/cache/dnf/baseos-929b586ef1f72f69/packages/gdbm-libs-1.18-1.el8.x86_64.rpm

You may need to download the missing package manually if dnf didn’t take them into set of packages to be upgraded. In addition I had to remove python3-pip-9.0.3 and python36-rpmconf, again, with rpm and ignoring dependencies. Then I started distro-sync.

In essence, what I’ve did is that I removed offending packages that were reported by dnf, and started dnf again. But be careful that you don’t remove something that is critical to rpm and dnf, otherwise, you won’t be able to upgrade the system.

mustaccio's user avatar

answered Oct 24, 2020 at 15:24

sgros's user avatar

sgrossgros

411 bronze badge

1

I had the same issue and the answer given by sgros was almost correct in our case, but I had to remove sysvinit and sysvinit-tools also.

answered Jan 20, 2021 at 20:23

SimonNZ's user avatar

Description of problem:

 Transaction test error:

Version-Release number of selected component (if applicable):
 F32 and I will try to upgrade


Actual results:

Error: Transaction test error:

 - Upgrade by gnome-software: process is counting more than 10min / no-limit

 - Upgry from terminal, using dnf:
  file /usr/share/gcc-10/python/libstdcxx/__pycache__/__init__.cpython-38.opt-1.pyc from install of libstdc++-10.1.1-1.fc32.i686 conflicts with file from package libstdc++-10.0.1-0.13.fc32.x86_64
  file /usr/share/gcc-10/python/libstdcxx/__pycache__/__init__.cpython-38.pyc from install of libstdc++-10.1.1-1.fc32.i686 conflicts with file from package libstdc++-10.0.1-0.13.fc32.x86_64
  file /usr/share/gcc-10/python/libstdcxx/v6/__pycache__/__init__.cpython-38.opt-1.pyc from install of libstdc++-10.1.1-1.fc32.i686 conflicts with file from package libstdc++-10.0.1-0.13.fc32.x86_64
  file /usr/share/gcc-10/python/libstdcxx/v6/__pycache__/__init__.cpython-38.pyc from install of libstdc++-10.1.1-1.fc32.i686 conflicts with file from package libstdc++-10.0.1-0.13.fc32.x86_64
  file /usr/share/gcc-10/python/libstdcxx/v6/__pycache__/printers.cpython-38.opt-1.pyc from install of libstdc++-10.1.1-1.fc32.i686 conflicts with file from package libstdc++-10.0.1-0.13.fc32.x86_64
  file /usr/share/gcc-10/python/libstdcxx/v6/__pycache__/printers.cpython-38.pyc from install of libstdc++-10.1.1-1.fc32.i686 conflicts with file from package libstdc++-10.0.1-0.13.fc32.x86_64
  file /usr/share/gcc-10/python/libstdcxx/v6/__pycache__/xmethods.cpython-38.opt-1.pyc from install of libstdc++-10.1.1-1.fc32.i686 conflicts with file from package libstdc++-10.0.1-0.13.fc32.x86_64
  file /usr/share/gcc-10/python/libstdcxx/v6/__pycache__/xmethods.cpython-38.pyc from install of libstdc++-10.1.1-1.fc32.i686 conflicts with file from package libstdc++-10.0.1-0.13.fc32.x86_64



Expected results:


Additional info:


Comment 1


Mars



2020-05-17 16:49:15 UTC

I solve it!! Sorry!

Gnome developers ask me to enable & install debuginfo packages.
Now I disable debuginfo repos and 4-5GB debuginfo pkg is removed, and libstdc++ is no longer needed.

set-disabled:
updates-debuginfo fedora-debuginfo fedora-cisco-openh264-debuginfo rpmfusion-free-debuginfo rpmfusion-free-updates-debuginfo


Comment 2


Marek Blaha



2020-05-18 11:49:36 UTC

Thank you. Anyway the bug looks like file conflict error that should be fixed on packaging level.
According to comment#1 I'm closing the bug.


Comment 3


Mars



2020-05-18 11:51:18 UTC

Thank you to

I have Fedora 33 and I want to install the updates with command:

sudo dnf update

Before confirmation of installation I see that dnf has found dependent package that should be installed: openssl-devel

While running transaction test I get an error:

Running transaction check
Transaction check succeeded.
Running transaction test
Error: Transaction test error:
  file /usr/include/openssl/aes.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/asn1.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/asn1t.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/bio.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/blowfish.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/bn.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/buffer.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/camellia.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/cast.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/cmac.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/cms.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/comp.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/conf.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/conf_api.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/crypto.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/des.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/dh.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/dsa.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/dtls1.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ec.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ecdh.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ecdsa.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/engine.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/err.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/evp.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/hmac.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/idea.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/lhash.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/md4.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/md5.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/modes.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/obj_mac.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/objects.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ocsp.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/opensslconf.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/opensslv.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ossl_typ.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/pem.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/pem2.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/pkcs12.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/pkcs7.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/rand.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/rc2.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/rc4.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ripemd.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/rsa.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/safestack.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/sha.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/srtp.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ssl.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ssl2.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ssl3.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/stack.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/tls1.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ts.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/txt_db.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/ui.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/whrlpool.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/x509.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/x509_vfy.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/include/openssl/x509v3.h from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/lib64/libcrypto.so from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/lib64/libssl.so from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/lib64/pkgconfig/libcrypto.pc from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/lib64/pkgconfig/libssl.pc from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64
  file /usr/lib64/pkgconfig/openssl.pc from install of openssl-devel-1:1.1.1k-1.fc33.x86_64 conflicts with file from package libressl-devel-3.2.5-1.x86_64

Please help with resolving this issue!

asked May 29, 2021 at 7:22

BIGMAN84's user avatar

0

I solved the problem myself by deleting it from the system.

The command for removing:
sudo dnf remove libressl-devel

The libressl and libressl-devel packages are also available for Fedora, but from the third party «RPM Sphere x86_64» repository. I tried to remove package libressl-devel and found that there is only one application on the system that depends on it, which is terminology (EFL based terminal emulator). I installed this application earlier and I no longer need it. So I just removed the package libressl-devel and terminology app that dependent on it.

After removing package libssl-devel I was successfully updated my Fedora 33 packages.

answered May 29, 2021 at 20:08

BIGMAN84's user avatar

Server version: 10.5.5-MariaDB MariaDB Server

hello — after installing 10.5 i get the following error:

# dnf  -y  update ;
Last metadata expiration check: 0:04:17 ago on Tue 18 Aug 2020 02:03:54 PM EDT.
Error:
 Problem: package mariadb-connector-c-devel-3.0.7-1.el8.x86_64 requires mariadb-connector-c = 3.0.7-1.el8, but none of the providers can be installed
  - package MariaDB-shared-10.5.5-1.el8.x86_64 obsoletes mariadb-connector-c provided by mariadb-connector-c-3.0.7-1.el8.x86_64
  - package MariaDB-shared-10.5.5-1.el8.x86_64 obsoletes mariadb-connector-c provided by mariadb-connector-c-3.0.7-1.el8.i686
  - cannot install the best update candidate for package mariadb-connector-c-devel-3.0.7-1.el8.x86_64
  - cannot install the best update candidate for package mariadb-connector-c-3.0.7-1.el8.x86_64
(try to add '--skip-broken' to skip uninstallable packages or '--nobest' to use not only best candidate packages)

suggestions?

Answer

Hi,

I’ve reported a bug for you here:

https://jira.mariadb.org/browse/MDEV-23506

In the mean time, I would suggest trying to work around this problem by doing something like this:

sudo yum remove mariadb-connector-c-devel
sudo yum install MariaDB-devel

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JohnMontes

Posts: 9
Joined: 2014/04/09 01:16:56

[SOLVED] Yum Transaction Check Error

Greetings all,

I’m having a tough time trying to get passed a yum transaction check error and cannot update packages on my CentOS 6.6 64bit system.

Below is the error message, a list of commands tried thus far, and the yum repos that I have.

Any tips or suggestions that might help?

Error Message:
Transaction Check Error:
file /usr/lib64/libpostproc.so.51.2.0 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-libpostproc-0.6.5-1.el6.rf.x86_64

Commands I’ve tried thus far
yum-complete-transaction
package-cleanup —dupes
package-cleanup —cleandupes
yum reinstall ffmpeg-compat-0.6.7-1.el6.x86_64
rpm -e —justdb ffmpeg-compat-0.6.7-1.el6.x86_64
yum update ffmpeg-compat-0.6.7-1.el6.x86_64
sudo yum update —skip-broken
sudo rpm -Va —nofiles —nodigest

List of Repos:
* base: centos.expedientevirtual.com
* elrepo: repos.dfw.lax-noc.com
* epel: mirror.cogentco.com
* extras: centos.expedientevirtual.com
* rpmforge: mirror.teklinks.com
* rpmfusion-free-updates: mirror.nexcess.net
* rpmfusion-nonfree-updates: mirror.nexcess.net
* updates: centos.arvixe.com

Last edited by JohnMontes on 2015/02/04 00:27:45, edited 1 time in total.


JohnMontes

Posts: 9
Joined: 2014/04/09 01:16:56

Re: Yum Transaction Check Error

Post

by JohnMontes » 2015/02/03 15:18:17

**UPDATE**

I was able to get rid of the initial ffmpeg-compat-0.6.7-1.el6.x86_64 conflict by removing the rpmforge repo
$ sudo yum remove rpmforge-release

However, now I get the following after running $ sudo yum update -y —skip-broken

Transaction Check Error:
file /usr/lib64/libpostproc.so.51.2.0 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-libpostproc-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libavcodec.so.52.72.2 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libavdevice.so.52.2.0 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libavfilter.so.1.19.0 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libavformat.so.52.64.2 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libavutil.so.50.15.1 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libswscale.so.0.11.0 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64


User avatar

TrevorH

Site Admin
Posts: 32527
Joined: 2009/09/24 10:40:56
Location: Brighton, UK

Re: Yum Transaction Check Error

Post

by TrevorH » 2015/02/03 16:23:34

Don’t use —skip-broken, it’s broken and I have no idea why the yum developers put out such a stupid suggestion as part of the error message. It really means «your system is broken, if you want to break it some more then do this»!

Your problem is that you have conflicting packages installed from different third party repos. Your current installation contains a package from rpmforge (hence the .rf. in its name). You’re trying to replace that with a newer package set from a different repo but the packages are structured in a different way. You can either remove the current set of packages first — but that’s likely to want to take out a bunch of other packages which depend on them, or you can try using yum shell to remove one set of packages and install the replacements in one transaction.

Code: Select all

yum shell
remove ffmpeg-libpostproc
install ffmpeg-compat
run

I don’t guarantee that will work either but I suspect it’s a far better attempt than —skip-broken.


JohnMontes

Posts: 9
Joined: 2014/04/09 01:16:56

Re: Yum Transaction Check Error

Post

by JohnMontes » 2015/02/03 17:34:18

Thanks so much for the tip Trevor.
I tried it out, it appeared it was going to work, but then other Transaction errors appeared, below is the sample output.

$ sudo yum shell
Loaded plugins: fastestmirror, refresh-packagekit, security
Setting up Yum Shell
> remove ffmpeg-libpostproc
Setting up Remove Process
> install ffmpeg-compat
Loading mirror speeds from cached hostfile
* base: centos.expedientevirtual.com
* elrepo: repos.dfw.lax-noc.com
* epel: mirror.cogentco.com
* extras: centos.expedientevirtual.com
* rpmfusion-free-updates: mirror.nexcess.net
* rpmfusion-nonfree-updates: mirror.nexcess.net
* updates: centos.arvixe.com
Setting up Install Process
> run
—> Running transaction check
—> Package ffmpeg-compat.x86_64 0:0.6.7-1.el6 will be installed
—> Processing Dependency: libx264.so.120()(64bit) for package: ffmpeg-compat-0.6.7-1.el6.x86_64
—> Package ffmpeg-libpostproc.x86_64 0:0.6.5-1.el6.rf will be erased
—> Running transaction check
—> Package x264-libs.x86_64 0:0.120-5.20120303.el6 will be installed
—> Finished Dependency Resolution

==========================================================================================================================================
Package Arch Version Repository Size
==========================================================================================================================================
Installing:
ffmpeg-compat x86_64 0.6.7-1.el6 rpmfusion-free-updates 2.6 M
Removing:
ffmpeg-libpostproc x86_64 0.6.5-1.el6.rf @rpmforge 122 k
Installing for dependencies:
x264-libs x86_64 0.120-5.20120303.el6 rpmfusion-free-updates 286 k

Transaction Summary
==========================================================================================================================================
Install 2 Package(s)
Remove 1 Package(s)

Total size: 2.9 M
Is this ok [y/N]: y
Downloading Packages:
Running rpm_check_debug
Running Transaction Test
Error: Transaction Check Error:
file /usr/lib64/libavcodec.so.52.72.2 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libavdevice.so.52.2.0 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libavfilter.so.1.19.0 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libavformat.so.52.64.2 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libavutil.so.50.15.1 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64
file /usr/lib64/libswscale.so.0.11.0 from install of ffmpeg-compat-0.6.7-1.el6.x86_64 conflicts with file from package ffmpeg-0.6.5-1.el6.rf.x86_64

Error Summary
————-


JohnMontes

Posts: 9
Joined: 2014/04/09 01:16:56

Re: Yum Transaction Check Error

Post

by JohnMontes » 2015/02/04 00:27:16

Yeah, the issue is fixed after making a minor adjustment, will mark this post as SOLVED :-)
Thanks for leading in the right direction Trevor

I had to add an additional statement to remove ffmpeg, and then perform the install ffmpeg-compat

yum shell
remove ffmpeg-libpostproc
remove ffmpeg
install ffmpeg-compat
run

> install ffmpeg-compat
Setting up Install Process
Loading mirror speeds from cached hostfile
* base: reflector.westga.edu
* elrepo: ftp.utexas.edu
* epel: mirror.oss.ou.edu
* extras: mirror.cisp.com
* rpmfusion-free-updates: mirror.web-ster.com
* rpmfusion-nonfree-updates: mirror.web-ster.com
* updates: ftpmirror.your.org
> run
—> Running transaction check
—> Package ffmpeg-compat.x86_64 0:0.6.7-1.el6 will be installed
—> Processing Dependency: libx264.so.120()(64bit) for package: ffmpeg-compat-0.6.7-1.el6.x86_64
—> Running transaction check
—> Package x264-libs.x86_64 0:0.120-5.20120303.el6 will be installed
—> Finished Dependency Resolution

===============================================================================================================================================================
Package Arch Version Repository Size
===============================================================================================================================================================
Installing:
ffmpeg-compat x86_64 0.6.7-1.el6 rpmfusion-free-updates 2.6 M
Installing for dependencies:
x264-libs x86_64 0.120-5.20120303.el6 rpmfusion-free-updates 286 k

Transaction Summary
===============================================================================================================================================================
Install 2 Package(s)

Total size: 2.9 M
Installed size: 7.6 M
Is this ok [y/N]: y
Downloading Packages:
Running rpm_check_debug
Running Transaction Test
Transaction Test Succeeded
Running Transaction
Installing : x264-libs-0.120-5.20120303.el6.x86_64 1/2
Installing : ffmpeg-compat-0.6.7-1.el6.x86_64 2/2
Verifying : ffmpeg-compat-0.6.7-1.el6.x86_64 1/2
Verifying : x264-libs-0.120-5.20120303.el6.x86_64 2/2

Installed:
ffmpeg-compat.x86_64 0:0.6.7-1.el6

Dependency Installed:
x264-libs.x86_64 0:0.120-5.20120303.el6

Finished Transaction
> exit


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